Could it be possible something on my SD card could cause this? Nothing that I know of has changed with regard to it. Here is the skinny though:
I was running SS3 in Safe Mode and in the main Rom slot, I had AOKP's 10.22 JB 4.1.2 build. In the 2nd Rom slot, I had Eclipse 1.3.4. I kept having problems with Eclipse getting stuck in a boot loop and it was irritating me, so I decided to flash back to stock everything for a clean install.
I had previously been running 6.16.217 in normal (unsafe) mode, but I never ever used that mode. Anyway, I flashed today around noon and have been battling ever since. Neither RDS or ICS Tools seems to work. I mean they both get through easily, error free, but then I cannot actually boot into android. I sometimes hang up on the black screen after the dual boot logo. Sometimes I hang up on "Starting Applications" I'm honestly thinking, I'm beat and I have to get a new phone.