EDIT: My running is at 99.7%(Since last unplugged). So that means I have a software problem? How do I narrow this problem down?
So it was 99.7% and the phone had just been sitting there with the screen off? You have an original Droid, right? But you're running BB...
You see, on the Droid X there is a bug where the phone won't "sleep". The solution on that phone is:
-turn off GPS when not in use
-turn off WIFI when not in use
-after charging, reboot phone
Is it possible that BB has this same bug? It could be. Why don't you try those workarounds and see if your Running % goes down to a more reasonable level after the phone has been sitting for a while? Just toggle that stuff off and reboot.
You can also mess around in the diagnostics screen. Use the pull down menu to check CPU usage. Any programs unusually high? If yes, you can see your problem. If not, it seems like it might be a BB problem. If safe mode doesn't fix it, reflash to something else like Saphire or whatever.
What does your "Partial wake usage" for Android System look like?
Also, under Battery Info how is your battery health, voltage, etc?