Not sure if this is a Thunderbolt issue or a Clockwork Recovery issue or I just have a bad install. But since I rooted and put Clockwork Recovery on the phone if the phone is turned off and I plug the charger into the usb port the phone boots into recovery.
I've never used Clockwork Recovery before. Is this normal behavior? And if so, is there a way to turn it off so I can charge the phone with the power turned off?