I discovered how to fix Nitroscript! The problem lies within setting the permissions of the /system/ directory. And where I have that figured out, my only problem is coding in the adb shell commands into my source code.
If anyone wants to help or even take a crack at it, the commands that do the equivalent to adb remount are a more direct way of doing this.
If ANYONE can help me code this into my program, that would be fantastic!
cmd: adb shell
shell: $ su
shell: # busybox mount -o remount,rw /system
shell: # chmod 777 /system
shell: # exit
shell: $ exit