This was a very strange problem, let me elaborate: I am running Bugless Beast 0.5 (I've had the issue since BB 0.3, with countless data/cache wipes and reinstalls, different kernels, theme's, you name it). The problem only seems to affect big apps (not exclusively though) that more often then not are games.
So the issue is not related to ROM. BUT, for Bugless Beast users, simply go into Terminal, then type
For those people who inevitably are reading through far too many forum threads searching for an answer, TRY THIS.
Thanks again FictionWeLive, I'm a big FATA fan as well